Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm14885-201ENSMUST00000117969 496 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm6893-201ENSMUST00000118385 522 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm12884-201ENSMUST00000120371 325 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm13232-201ENSMUST00000121816 632 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm8988-201ENSMUST00000155015 1240 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm6155-201ENSMUST00000173735 341 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Mir6391-201ENSMUST00000184391 104 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm29281-201ENSMUST00000188077 381 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm37095-201ENSMUST00000195421 205 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm37836-201ENSMUST00000195875 175 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm43828-201ENSMUST00000196890 639 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm43005-201ENSMUST00000199015 648 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm33626-201ENSMUST00000206790 828 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm45200-201ENSMUST00000207434 919 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm18258-201ENSMUST00000210413 542 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Cdc40Q9DC48 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Cdc40Q9DC48 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Cdc40Q9DC48 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Cdc40Q9DC48 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm23193-201ENSMUST00000102427 82 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm23709-201ENSMUST00000104364 130 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm23496-201ENSMUST00000157741 248 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm16378-201ENSMUST00000179168 342 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm5372-201ENSMUST00000187540 409 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm17953-201ENSMUST00000192061 667 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm44474-201ENSMUST00000196525 127 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm23464-201ENSMUST00000083145 147 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm25821-201ENSMUST00000093657 133 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdc40Q9DC48 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm24125-201ENSMUST00000104105 137 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm23594-201ENSMUST00000104307 134 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm12062-201ENSMUST00000117533 259 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm14388-201ENSMUST00000118119 477 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm11510-201ENSMUST00000120278 347 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm14784-201ENSMUST00000121604 663 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm3091-201ENSMUST00000163408 484 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm18128-201ENSMUST00000172625 511 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Mir3058-201ENSMUST00000175126 91 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Mir6960-201ENSMUST00000183449 61 ntBASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.2□□□□□ -1.74
Cdc40Q9DC48 Gm28118-201ENSMUST00000185957 294 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms