Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm11877-201ENSMUST00000118921 852 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm11448-201ENSMUST00000120427 450 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm25806-201ENSMUST00000122782 122 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm24931-201ENSMUST00000158324 107 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm16134-201ENSMUST00000161714 336 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Mir6391-201ENSMUST00000184391 104 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm8891-201ENSMUST00000198546 832 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm45689-201ENSMUST00000210522 133 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.16□□□□□ -1.58
Smc1aQ9CU62 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Smc1aQ9CU62 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.15□□□□□ -1.58
Smc1aQ9CU62 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.15□□□□□ -1.58
Smc1aQ9CU62 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.15□□□□□ -1.58
Smc1aQ9CU62 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.15□□□□□ -1.58
Smc1aQ9CU62 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Smc1aQ9CU62 Gm14621-201ENSMUST00000117709 689 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm11409-201ENSMUST00000118621 403 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm22859-201ENSMUST00000174978 122 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm20701-201ENSMUST00000176082 347 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Rab26os-201ENSMUST00000176215 477 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm26983-201ENSMUST00000182051 388 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Mir6933-201ENSMUST00000184982 81 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm18181-201ENSMUST00000190670 736 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm6546-201ENSMUST00000192096 766 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm25821-201ENSMUST00000093657 133 ntBASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Smc1aQ9CU62 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm12186-201ENSMUST00000119050 945 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm15206-201ENSMUST00000119143 454 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm11965-201ENSMUST00000122017 277 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm22343-201ENSMUST00000122648 286 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm25427-201ENSMUST00000157605 103 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm25913-201ENSMUST00000157617 135 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm26828-201ENSMUST00000180640 172 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm27611-201ENSMUST00000184690 108 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm29610-201ENSMUST00000187749 453 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm28060-201ENSMUST00000191554 189 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm37878-201ENSMUST00000192108 387 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm37961-201ENSMUST00000192729 299 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm37836-201ENSMUST00000195875 175 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm43968-201ENSMUST00000203388 389 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm45200-201ENSMUST00000207434 919 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm6230-201ENSMUST00000208077 780 ntBASIC5.14□□□□□ -1.59
Smc1aQ9CU62 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.14□□□□□ -1.59
Smc1aQ9CU62 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms