Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm9227-201ENSMUST00000194733 566 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm9632-201ENSMUST00000195934 643 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm7166-201ENSMUST00000199715 303 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm17991-201ENSMUST00000208139 297 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm46146-201ENSMUST00000217483 346 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm7887-201ENSMUST00000056948 537 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm23737-201ENSMUST00000082547 159 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm25401-201ENSMUST00000082975 106 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim11Q99PQ2 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Mir759-201ENSMUST00000103254 98 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm24434-201ENSMUST00000104081 132 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm23440-201ENSMUST00000104299 130 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm24683-201ENSMUST00000104840 88 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm14909-201ENSMUST00000117853 351 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm13835-201ENSMUST00000118459 685 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm12803-201ENSMUST00000118907 821 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm6587-201ENSMUST00000120219 613 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm13578-201ENSMUST00000120849 590 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm17054-201ENSMUST00000169811 259 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm20620-201ENSMUST00000177528 168 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm4832-201ENSMUST00000182679 399 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm43039-201ENSMUST00000202883 963 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm6850-201ENSMUST00000210031 530 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm7802-201ENSMUST00000216464 262 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm5649-201ENSMUST00000217918 951 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 AC120540.1-201ENSMUST00000221879 324 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm10108-201ENSMUST00000078246 319 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm26072-201ENSMUST00000083135 107 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm7133-201ENSMUST00000187797 2039 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim11Q99PQ2 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Mir804-201ENSMUST00000103251 95 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm15660-201ENSMUST00000118997 478 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm6264-202ENSMUST00000162896 1217 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm27512-201ENSMUST00000175328 126 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm10193-201ENSMUST00000188288 231 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm42961-201ENSMUST00000202023 181 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm3148-201ENSMUST00000203594 612 ntBASIC6.56□□□□□ -1.36
Trim11Q99PQ2 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms