Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm3933-201ENSMUST00000195391 439 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm36382-201ENSMUST00000198892 541 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm43794-201ENSMUST00000200971 692 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm32536-201ENSMUST00000205209 445 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm44681-201ENSMUST00000208447 842 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm9512-201ENSMUST00000223112 497 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm7040-201ENSMUST00000223271 443 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 CT009733.1-203ENSMUST00000224033 451 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Clec2j-201ENSMUST00000032517 515 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm26064-201ENSMUST00000083381 109 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm25004-201ENSMUST00000083811 161 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cstf3Q99LI7 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm25919-201ENSMUST00000104271 132 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm11550-201ENSMUST00000118210 699 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm4342-201ENSMUST00000118982 367 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm14655-201ENSMUST00000120124 578 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm14619-201ENSMUST00000120480 168 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm12881-201ENSMUST00000121191 203 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm16259-201ENSMUST00000145241 553 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm24860-201ENSMUST00000158457 276 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm25906-201ENSMUST00000158489 126 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm18604-201ENSMUST00000172535 558 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Mir3110-201ENSMUST00000175053 80 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm28917-201ENSMUST00000187294 237 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm28766-201ENSMUST00000191086 234 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm37243-201ENSMUST00000193407 595 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm21006-201ENSMUST00000196930 667 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm42437-201ENSMUST00000197263 923 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm2011-203ENSMUST00000203750 435 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cstf3Q99LI7 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms