Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm13771-201ENSMUST00000117988 238 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm14388-201ENSMUST00000118119 477 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm11633-201ENSMUST00000118176 444 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm12222-201ENSMUST00000121368 260 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm25278-201ENSMUST00000157267 120 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm24685-201ENSMUST00000157764 285 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Mir6938-201ENSMUST00000184173 63 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm27636-201ENSMUST00000184528 122 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm17981-201ENSMUST00000191109 739 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm43309-201ENSMUST00000200837 458 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm44817-201ENSMUST00000205416 453 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm8556-201ENSMUST00000210437 664 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm45499-201ENSMUST00000211656 280 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm36501-201ENSMUST00000221857 745 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm26449-201ENSMUST00000082452 104 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm22220-201ENSMUST00000082671 149 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Snord15b-201ENSMUST00000083032 145 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm25099-201ENSMUST00000093716 116 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 AC168056.3-201ENSMUST00000225395 2540 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.43□□□□□ -1.86
Nup35Q8R4R6 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Mir1188-201ENSMUST00000116756 120 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Mir466j-201ENSMUST00000116876 122 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm13550-201ENSMUST00000118185 525 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm13932-201ENSMUST00000120873 610 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm25456-201ENSMUST00000157952 109 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm24188-201ENSMUST00000157980 108 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm16303-201ENSMUST00000161498 390 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm6137-201ENSMUST00000187552 578 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm37631-201ENSMUST00000192275 364 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm43919-201ENSMUST00000204303 364 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm8132-201ENSMUST00000204938 640 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm45031-201ENSMUST00000206800 288 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm40692-201ENSMUST00000220411 491 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AC132446.1-201ENSMUST00000222655 226 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm23464-201ENSMUST00000083145 147 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm43319-201ENSMUST00000198036 2270 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.42□□□□□ -1.86
Nup35Q8R4R6 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms