Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm22002-201ENSMUST00000175622 125 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm25874-201ENSMUST00000178030 79 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm22776-201ENSMUST00000178634 94 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm23767-201ENSMUST00000179278 94 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm27030-201ENSMUST00000182551 464 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm37336-202ENSMUST00000193705 468 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm36953-201ENSMUST00000195295 268 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm42522-201ENSMUST00000196071 255 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Mir219c-201ENSMUST00000199860 60 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm43418-201ENSMUST00000201334 428 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm44134-202ENSMUST00000204777 545 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm44634-201ENSMUST00000206119 152 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm18672-201ENSMUST00000208035 270 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm22807-201ENSMUST00000082737 129 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm26064-201ENSMUST00000083381 109 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm14901-201ENSMUST00000119001 283 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm13259-201ENSMUST00000120792 456 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm12819-201ENSMUST00000122223 629 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm23228-201ENSMUST00000157296 270 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm23669-201ENSMUST00000157470 128 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm23450-201ENSMUST00000178285 91 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm29376-201ENSMUST00000189357 835 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm8419-201ENSMUST00000189886 412 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm17981-201ENSMUST00000191109 739 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm42539-201ENSMUST00000197009 308 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm45690-201ENSMUST00000210775 246 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm18113-201ENSMUST00000220630 303 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Clrn1Q8K445 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.16□□□□□ -1.58
Clrn1Q8K445 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Clrn1Q8K445 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms