Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43649-201ENSMUST00000196596 391 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm4410-201ENSMUST00000199349 686 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm4714-201ENSMUST00000203395 279 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm8132-201ENSMUST00000204938 640 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm17766-201ENSMUST00000209223 442 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm23099-201ENSMUST00000083454 139 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trub1Q8C0D0 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.36□□□□□ -1.71
Trub1Q8C0D0 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm16420-201ENSMUST00000120258 856 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm22453-201ENSMUST00000122801 318 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm22698-201ENSMUST00000175375 108 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm37836-201ENSMUST00000195875 175 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm44032-201ENSMUST00000204841 166 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm8319-201ENSMUST00000205708 641 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm10145-201ENSMUST00000077776 462 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm8724-201ENSMUST00000081668 483 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm22350-201ENSMUST00000083924 156 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trub1Q8C0D0 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm5060-201ENSMUST00000120072 599 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm14122-201ENSMUST00000122076 973 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm20561-201ENSMUST00000188131 292 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm29428-201ENSMUST00000190086 409 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm35702-201ENSMUST00000198653 511 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm44952-201ENSMUST00000204443 433 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Gm18377-201ENSMUST00000215141 607 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.34□□□□□ -1.71
Trub1Q8C0D0 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Mir99a-201ENSMUST00000083596 65 ntBASIC4.34□□□□□ -1.71
Trub1Q8C0D0 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Trub1Q8C0D0 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trub1Q8C0D0 Gm14365-201ENSMUST00000117535 587 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms