Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm24773-201ENSMUST00000158513 99 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm10087-201ENSMUST00000167650 330 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm29086-201ENSMUST00000186774 222 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm29085-201ENSMUST00000187108 225 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm20203-201ENSMUST00000192352 332 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm9238-201ENSMUST00000196181 329 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm18100-201ENSMUST00000200897 452 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm24268-201ENSMUST00000082990 110 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp40Q8BWR4 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 BC055308-201ENSMUST00000193380 2538 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Mir467g-201ENSMUST00000116906 120 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm15159-201ENSMUST00000117062 764 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm9432-201ENSMUST00000117810 759 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm11385-201ENSMUST00000121513 570 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm22343-201ENSMUST00000122648 286 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm23145-201ENSMUST00000178912 79 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm5473-201ENSMUST00000179326 642 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm27690-201ENSMUST00000184596 126 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm7654-201ENSMUST00000186738 683 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm29138-201ENSMUST00000191444 348 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm28639-201ENSMUST00000191519 481 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm42663-201ENSMUST00000199883 351 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm45673-201ENSMUST00000210293 358 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 AC121844.1-201ENSMUST00000218706 137 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr790-204ENSMUST00000218901 1070 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp40Q8BWR4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm37761-201ENSMUST00000194989 2098 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm24469-201ENSMUST00000104487 131 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm14931-201ENSMUST00000111079 253 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm15010-201ENSMUST00000117153 407 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm12090-201ENSMUST00000118692 758 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm6373-201ENSMUST00000121026 360 ntBASIC6.85□□□□□ -1.31
Usp40Q8BWR4 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms