Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm10552-201ENSMUST00000113396 372 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm7834-201ENSMUST00000117560 437 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm26098-201ENSMUST00000157247 288 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm16134-201ENSMUST00000161714 336 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm5511-201ENSMUST00000189380 802 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm29097-201ENSMUST00000190273 422 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm6546-201ENSMUST00000192096 766 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm2053-201ENSMUST00000195671 631 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm36382-201ENSMUST00000198892 541 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm43841-201ENSMUST00000199491 586 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm44402-201ENSMUST00000203677 238 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm44869-201ENSMUST00000208836 357 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm45367-201ENSMUST00000210171 347 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm7128-201ENSMUST00000211639 533 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.84□□□□□ -1.63
Ccdc40Q8BI79 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.84□□□□□ -1.64
Ccdc40Q8BI79 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ccdc40Q8BI79 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm12230-201ENSMUST00000118301 454 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm12577-201ENSMUST00000119701 574 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm12564-201ENSMUST00000119860 321 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm13815-201ENSMUST00000119963 412 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm15019-201ENSMUST00000120148 434 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm12808-201ENSMUST00000120597 404 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm13092-201ENSMUST00000136346 260 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm23960-201ENSMUST00000157206 131 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm3531-201ENSMUST00000162698 489 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Mir6238-201ENSMUST00000184140 129 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm18406-201ENSMUST00000185872 669 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm28097-201ENSMUST00000187333 366 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm42830-201ENSMUST00000196642 313 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm44523-201ENSMUST00000205616 417 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm44779-201ENSMUST00000206937 708 ntBASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc40Q8BI79 Gm23456-201ENSMUST00000083335 137 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms