Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir17-201ENSMUST00000083574 84 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm22864-201ENSMUST00000083950 130 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm3563-201ENSMUST00000172963 1628 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm14771-201ENSMUST00000118249 203 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm14007-201ENSMUST00000118288 210 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm11346-201ENSMUST00000118346 704 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm16100-201ENSMUST00000120489 231 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm24477-201ENSMUST00000157438 103 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm23534-201ENSMUST00000157539 97 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm22804-201ENSMUST00000158052 101 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm8614-201ENSMUST00000182528 978 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm43631-201ENSMUST00000202011 369 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm44404-201ENSMUST00000203979 636 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm44307-201ENSMUST00000204466 764 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm7128-201ENSMUST00000211639 533 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm5750-201ENSMUST00000218711 801 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm9512-201ENSMUST00000223112 497 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC167192.4-201ENSMUST00000224087 993 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ubfd1Q78JW9 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm12667-201ENSMUST00000118299 1332 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm44250-201ENSMUST00000203092 4229 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm42955-201ENSMUST00000197355 3393 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm11914-201ENSMUST00000117094 507 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm14750-201ENSMUST00000118262 516 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm15878-201ENSMUST00000127561 306 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm16363-201ENSMUST00000132460 877 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm25966-201ENSMUST00000157169 117 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm23754-201ENSMUST00000157576 63 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm26401-201ENSMUST00000158502 76 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm3221-201ENSMUST00000164869 440 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms