Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm12112-201ENSMUST00000117772 231 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm26350-201ENSMUST00000157531 288 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm23385-201ENSMUST00000158592 295 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm3102-201ENSMUST00000164236 489 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm17064-201ENSMUST00000167690 452 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm24969-201ENSMUST00000180331 79 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm28788-201ENSMUST00000189717 375 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm5734-201ENSMUST00000189787 913 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm29558-201ENSMUST00000190134 375 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm10292-202ENSMUST00000193165 585 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm43582-201ENSMUST00000196149 343 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm8556-201ENSMUST00000210437 664 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm18704-201ENSMUST00000219736 446 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm14445-201ENSMUST00000117051 1484 ntBASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ddx55Q6ZPL9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm14304-201ENSMUST00000117272 446 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm14007-201ENSMUST00000118288 210 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm12884-201ENSMUST00000120371 325 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm14563-201ENSMUST00000120571 354 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm16250-201ENSMUST00000148974 256 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Zakit-201ENSMUST00000157677 308 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm22804-201ENSMUST00000158052 101 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm23046-201ENSMUST00000158369 284 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm23354-201ENSMUST00000158426 104 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm25048-201ENSMUST00000158598 91 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm27522-201ENSMUST00000183949 230 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm27564-201ENSMUST00000185196 96 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm37878-201ENSMUST00000192108 387 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm37167-201ENSMUST00000194946 396 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm37836-201ENSMUST00000195875 175 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm24319-201ENSMUST00000083389 107 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Mir346-201ENSMUST00000083547 98 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.76□□□□□ -1.49
Ddx55Q6ZPL9 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ddx55Q6ZPL9 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.75□□□□□ -1.49
Ddx55Q6ZPL9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.75□□□□□ -1.49
Ddx55Q6ZPL9 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms