Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm25808-201ENSMUST00000122784 284 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm25909-201ENSMUST00000157619 121 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm24853-201ENSMUST00000158026 121 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm8338-201ENSMUST00000163928 363 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm19932-201ENSMUST00000177033 313 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm25525-201ENSMUST00000177701 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm26178-201ENSMUST00000177706 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm26465-201ENSMUST00000178517 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm24317-201ENSMUST00000178536 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm25021-201ENSMUST00000179184 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm22995-201ENSMUST00000179670 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm24424-201ENSMUST00000179714 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm24389-201ENSMUST00000179962 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm25672-201ENSMUST00000180111 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm26923-201ENSMUST00000182615 996 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm29163-201ENSMUST00000188029 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm29201-201ENSMUST00000189120 431 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm44409-201ENSMUST00000198810 166 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm18644-201ENSMUST00000211458 815 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm3266-201ENSMUST00000217832 591 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm19441-201ENSMUST00000221545 330 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm23815-201ENSMUST00000083231 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm23520-201ENSMUST00000093736 107 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Scaf4Q6PFF0 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm25795-201ENSMUST00000104421 132 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm24069-201ENSMUST00000104512 127 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm11271-201ENSMUST00000116054 440 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm15078-201ENSMUST00000118371 782 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm13603-201ENSMUST00000119404 83 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm11759-201ENSMUST00000121742 464 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm14162-201ENSMUST00000121985 601 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm8121-201ENSMUST00000153583 499 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Mir1953-201ENSMUST00000157866 89 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm25013-201ENSMUST00000158402 128 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm10074-201ENSMUST00000174543 249 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm26925-201ENSMUST00000182470 957 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm28016-201ENSMUST00000184594 196 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm28418-201ENSMUST00000186179 423 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm17981-201ENSMUST00000191109 739 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm37375-201ENSMUST00000193859 387 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm37385-201ENSMUST00000195223 387 ntBASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Scaf4Q6PFF0 Gm43631-201ENSMUST00000202011 369 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms