Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm23746-201ENSMUST00000104229 125 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm13250-201ENSMUST00000117209 753 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm8145-201ENSMUST00000118220 745 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm16106-201ENSMUST00000119187 294 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm12383-201ENSMUST00000120628 760 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm11389-201ENSMUST00000121407 430 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm22958-201ENSMUST00000122512 184 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm20657-201ENSMUST00000177079 515 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm27817-201ENSMUST00000184302 233 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm3816-201ENSMUST00000209803 433 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm2607-201ENSMUST00000212389 627 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp49Q6P9L4 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.35□□□□□ -1.55
Usp49Q6P9L4 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm28359-201ENSMUST00000187470 1322 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm14388-201ENSMUST00000118119 477 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm14352-201ENSMUST00000119250 449 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm12231-201ENSMUST00000119447 695 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm13213-201ENSMUST00000119668 474 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm16345-201ENSMUST00000146065 158 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Snora81-201ENSMUST00000157310 178 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm22870-201ENSMUST00000157501 112 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm23205-201ENSMUST00000158671 103 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm27551-201ENSMUST00000184258 77 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm37845-201ENSMUST00000194977 355 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm43524-201ENSMUST00000197278 298 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Mir5121-201ENSMUST00000198528 74 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm4859-201ENSMUST00000199625 787 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm44402-201ENSMUST00000203677 238 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm44952-201ENSMUST00000204443 433 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm5317-201ENSMUST00000204445 847 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm34224-201ENSMUST00000204606 364 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm44773-201ENSMUST00000207374 557 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm46103-201ENSMUST00000217614 341 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 CT025525.2-201ENSMUST00000227743 423 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp49Q6P9L4 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp49Q6P9L4 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp49Q6P9L4 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp49Q6P9L4 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp49Q6P9L4 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.33□□□□□ -1.56
Usp49Q6P9L4 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp49Q6P9L4 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Usp49Q6P9L4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Usp49Q6P9L4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms