Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim43aQ3TL54 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm13785-201ENSMUST00000119099 690 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm6062-201ENSMUST00000120462 631 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm21850-201ENSMUST00000179792 359 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm28190-201ENSMUST00000189766 722 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm4290-201ENSMUST00000206897 814 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.68□□□□□ -1.66
Trim43aQ3TL54 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm22498-201ENSMUST00000104497 86 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm12186-201ENSMUST00000119050 945 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm14122-201ENSMUST00000122076 973 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm7840-201ENSMUST00000122086 533 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Mir6963-201ENSMUST00000183535 71 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Mir7031-201ENSMUST00000183860 65 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm38046-201ENSMUST00000192733 550 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm28724-202ENSMUST00000194218 295 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm43774-201ENSMUST00000196327 878 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm42830-201ENSMUST00000196642 313 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm43856-201ENSMUST00000197004 369 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm43892-201ENSMUST00000204373 265 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm20586-201ENSMUST00000210122 547 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm45392-201ENSMUST00000210441 214 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim43aQ3TL54 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Neat1-201ENSMUST00000173672 20771 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Gm23594-201ENSMUST00000104307 134 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Gm24608-201ENSMUST00000104381 136 ntBASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim43aQ3TL54 Gm11633-201ENSMUST00000118176 444 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms