Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3b6P59708 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3b6P59708 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3b6P59708 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.29□□□□□ -1.56
Sf3b6P59708 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3b6P59708 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sf3b6P59708 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm13176-201ENSMUST00000117910 477 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm5942-201ENSMUST00000120046 439 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm16016-201ENSMUST00000120831 550 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm12451-201ENSMUST00000121636 633 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm13669-201ENSMUST00000122366 457 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm24741-201ENSMUST00000158857 106 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm23343-201ENSMUST00000158964 143 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm36984-201ENSMUST00000192770 235 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm2623-201ENSMUST00000199229 286 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm45081-201ENSMUST00000206281 572 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm45590-201ENSMUST00000209715 262 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm26439-201ENSMUST00000082592 106 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm23733-201ENSMUST00000083750 106 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sf3b6P59708 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sf3b6P59708 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sf3b6P59708 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm11322-201ENSMUST00000118095 435 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm12717-201ENSMUST00000118427 983 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm7927-201ENSMUST00000118818 880 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm13503-201ENSMUST00000119017 446 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm11227-201ENSMUST00000119774 471 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm13677-201ENSMUST00000120739 595 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm15014-201ENSMUST00000120742 258 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm12396-201ENSMUST00000121600 306 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm2986-201ENSMUST00000121603 382 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm25784-201ENSMUST00000122524 81 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm22945-201ENSMUST00000158557 157 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Scarna10-201ENSMUST00000158992 325 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm16134-201ENSMUST00000161714 336 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm24103-201ENSMUST00000174930 77 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm38075-201ENSMUST00000191979 920 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.27□□□□□ -1.57
Sf3b6P59708 Gm37111-201ENSMUST00000193250 634 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms