Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Shmt1P50431 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Gm17086-201ENSMUST00000171346 484 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm26731-201ENSMUST00000180683 543 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm28190-201ENSMUST00000189766 722 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm37946-201ENSMUST00000192064 347 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm18340-201ENSMUST00000196342 609 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.52□□□□□ -1.53
Shmt1P50431 Gm2645-201ENSMUST00000223516 547 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Shmt1P50431 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.52□□□□□ -1.53
Shmt1P50431 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Shmt1P50431 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Shmt1P50431 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Shmt1P50431 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Shmt1P50431 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Shmt1P50431 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Shmt1P50431 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm24170-201ENSMUST00000104124 133 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm12281-201ENSMUST00000119536 298 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm7973-201ENSMUST00000122107 488 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm24444-201ENSMUST00000157244 308 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm7346-201ENSMUST00000169661 476 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm26925-201ENSMUST00000182470 957 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm27528-201ENSMUST00000183544 205 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm29545-201ENSMUST00000188878 694 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm43096-201ENSMUST00000196173 421 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm42622-201ENSMUST00000197229 355 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm9173-201ENSMUST00000198054 400 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm4321-201ENSMUST00000200520 442 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm45034-201ENSMUST00000206831 482 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm44776-201ENSMUST00000207212 381 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm36247-201ENSMUST00000211834 285 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Gm18247-201ENSMUST00000222937 601 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm4963-201ENSMUST00000072718 378 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Shmt1P50431 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.51□□□□□ -1.53
Shmt1P50431 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms