Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm12900-201ENSMUST00000120919 573 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm11321-201ENSMUST00000121257 902 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm12504-202ENSMUST00000148026 306 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm25387-201ENSMUST00000157813 132 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.75□□□□□ -1.33
Rfx1P48377 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm19560-201ENSMUST00000177510 514 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm8807-201ENSMUST00000179328 492 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm27037-201ENSMUST00000182270 960 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.75□□□□□ -1.33
Rfx1P48377 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm37189-201ENSMUST00000192131 298 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm37869-201ENSMUST00000193385 595 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm17834-201ENSMUST00000204322 891 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.75□□□□□ -1.33
Rfx1P48377 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 AC145736.1-201ENSMUST00000214661 479 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.75□□□□□ -1.33
Rfx1P48377 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Rfx1P48377 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm23737-201ENSMUST00000082547 159 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Rfx1P48377 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm10936-201ENSMUST00000105264 252 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm14835-201ENSMUST00000119039 315 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm14837-201ENSMUST00000119688 206 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm15237-201ENSMUST00000122104 469 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm11341-201ENSMUST00000122316 447 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm12488-201ENSMUST00000122449 499 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.74□□□□□ -1.33
Rfx1P48377 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm24897-201ENSMUST00000179033 107 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm28628-201ENSMUST00000187006 264 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm37353-201ENSMUST00000194497 313 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm18702-201ENSMUST00000196923 588 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm44465-201ENSMUST00000199536 114 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm6719-201ENSMUST00000202067 335 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm36501-201ENSMUST00000221857 745 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 AC119573.1-201ENSMUST00000227960 757 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Rfx1P48377 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Rfx1P48377 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm24623-201ENSMUST00000082616 194 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm25133-201ENSMUST00000082647 130 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Snora30-201ENSMUST00000083325 130 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Rfx1P48377 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.74□□□□□ -1.33
Rfx1P48377 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Rfx1P48377 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Rfx1P48377 Gm23133-201ENSMUST00000104255 135 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Gm25563-201ENSMUST00000104603 74 ntBASIC6.73□□□□□ -1.33
Rfx1P48377 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms