Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm8129-201ENSMUST00000118230 213 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm15745-201ENSMUST00000119807 115 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm24751-201ENSMUST00000157844 102 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm16589-201ENSMUST00000159522 918 ntBASIC5.44□□□□□ -1.54
Traf1P39428 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Gm27286-201ENSMUST00000184934 179 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm28974-201ENSMUST00000187893 231 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm36985-201ENSMUST00000195595 379 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm43308-201ENSMUST00000197236 373 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.44□□□□□ -1.54
Traf1P39428 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.44□□□□□ -1.54
Traf1P39428 Gm46369-201ENSMUST00000221577 401 ntBASIC5.44□□□□□ -1.54
Traf1P39428 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.44□□□□□ -1.54
Traf1P39428 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.44□□□□□ -1.54
Traf1P39428 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Mir27a-201ENSMUST00000083510 87 ntBASIC5.44□□□□□ -1.54
Traf1P39428 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Traf1P39428 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Traf1P39428 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.44□□□□□ -1.54
Traf1P39428 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Traf1P39428 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Traf1P39428 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Traf1P39428 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Traf1P39428 Gm23746-201ENSMUST00000104229 125 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Traf1P39428 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.43□□□□□ -1.54
Traf1P39428 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Gm25966-201ENSMUST00000157169 117 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Gm24507-201ENSMUST00000157683 134 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Gm15508-201ENSMUST00000160330 325 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Gm18128-201ENSMUST00000172625 511 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Traf1P39428 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC5.43□□□□□ -1.54
Traf1P39428 Gm32536-201ENSMUST00000205209 445 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Gm19181-201ENSMUST00000218891 940 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Traf1P39428 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
Traf1P39428 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Traf1P39428 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.43□□□□□ -1.54
Traf1P39428 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Traf1P39428 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Traf1P39428 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.42□□□□□ -1.54
Traf1P39428 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Gm14861-201ENSMUST00000119451 455 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm11483-201ENSMUST00000119839 247 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm22726-201ENSMUST00000158089 179 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Gm29552-201ENSMUST00000190548 660 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm44474-201ENSMUST00000196525 127 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm42539-201ENSMUST00000197009 308 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm43276-201ENSMUST00000199712 364 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Gm46327-201ENSMUST00000218240 365 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Gm18442-201ENSMUST00000220925 639 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Traf1P39428 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Traf1P39428 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Traf1P39428 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Traf1P39428 Svet1-201ENSMUST00000209370 3940 ntBASIC5.42□□□□□ -1.54
Traf1P39428 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms