Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LdlrP35951 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LdlrP35951 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LdlrP35951 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm22195-201ENSMUST00000116861 108 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm15001-201ENSMUST00000117657 795 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm12638-201ENSMUST00000119531 298 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm12074-201ENSMUST00000120189 219 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm14725-201ENSMUST00000120324 828 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm15166-201ENSMUST00000120790 385 ntBASIC5.27□□□□□ -1.57
LdlrP35951 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm23965-201ENSMUST00000157969 142 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm22326-201ENSMUST00000158897 351 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm8358-201ENSMUST00000167222 555 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm17223-201ENSMUST00000171413 481 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm23162-201ENSMUST00000175081 121 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm37219-201ENSMUST00000192036 926 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm18340-201ENSMUST00000196342 609 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm18702-201ENSMUST00000196923 588 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm6850-201ENSMUST00000210031 530 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm18587-201ENSMUST00000213736 841 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.27□□□□□ -1.57
LdlrP35951 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.27□□□□□ -1.57
LdlrP35951 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LdlrP35951 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm22807-201ENSMUST00000082737 129 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm24921-201ENSMUST00000083024 107 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LdlrP35951 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LdlrP35951 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LdlrP35951 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.27□□□□□ -1.57
LdlrP35951 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LdlrP35951 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LdlrP35951 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Gm22072-201ENSMUST00000116850 121 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm15385-201ENSMUST00000118725 667 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm14125-202ENSMUST00000120921 756 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm7670-201ENSMUST00000121272 641 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm23885-201ENSMUST00000122682 294 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LdlrP35951 Gm26312-201ENSMUST00000157769 165 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm23354-201ENSMUST00000158426 104 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Mir1963-201ENSMUST00000158594 59 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm24175-201ENSMUST00000158931 129 ntBASIC5.26□□□□□ -1.57
LdlrP35951 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LdlrP35951 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms