Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm45458-201ENSMUST00000209900 522 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm6863-201ENSMUST00000052882 636 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm11212-201ENSMUST00000118337 618 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm14876-201ENSMUST00000120795 327 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm20701-201ENSMUST00000176082 347 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm24949-201ENSMUST00000183609 215 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm5252-201ENSMUST00000189030 909 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm38330-201ENSMUST00000192743 959 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm6057-201ENSMUST00000195927 314 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm44389-201ENSMUST00000203795 182 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm26437-201ENSMUST00000082595 105 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.23□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm12978-201ENSMUST00000121250 522 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm15022-201ENSMUST00000122074 746 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm15279-201ENSMUST00000155593 288 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm24636-201ENSMUST00000158673 288 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm27414-201ENSMUST00000185033 381 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm29228-201ENSMUST00000185489 418 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm37088-201ENSMUST00000193887 406 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm43710-201ENSMUST00000199583 452 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm6171-201ENSMUST00000220760 645 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdhb9E9Q5G2 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.21□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms