Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm44667-201ENSMUST00000207632 3337 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm38067-201ENSMUST00000192346 1911 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm23271-201ENSMUST00000104052 124 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm14790-201ENSMUST00000117760 1293 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm7241-201ENSMUST00000159853 357 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm6900-201ENSMUST00000178971 342 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm6057-201ENSMUST00000195927 314 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm7946-201ENSMUST00000203326 958 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr936-202ENSMUST00000216912 937 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm44530-201ENSMUST00000207920 3559 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm43428-201ENSMUST00000200108 3845 ntBASIC3.57□□□□□ -1.84
Col6a4A2AX52 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a4A2AX52 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm15981-201ENSMUST00000119196 457 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm3788-201ENSMUST00000119949 136 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm29704-201ENSMUST00000196011 253 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm19243-201ENSMUST00000198592 269 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm8820-201ENSMUST00000204077 571 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm45080-201ENSMUST00000206648 283 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm34779-201ENSMUST00000210036 263 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm18377-201ENSMUST00000215141 607 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm18116-201ENSMUST00000220920 537 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm15916-201ENSMUST00000118355 736 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm11200-201ENSMUST00000121698 448 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm24477-201ENSMUST00000157438 103 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm25667-201ENSMUST00000157701 275 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm23112-201ENSMUST00000158606 125 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Mir7669-201ENSMUST00000183442 58 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm37104-201ENSMUST00000193278 196 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm43084-201ENSMUST00000200696 947 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm18482-201ENSMUST00000202405 760 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm44294-201ENSMUST00000205090 728 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm17779-201ENSMUST00000213395 394 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm43211-201ENSMUST00000196901 1899 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm43462-201ENSMUST00000200265 3648 ntBASIC3.56□□□□□ -1.84
Col6a4A2AX52 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a4A2AX52 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a4A2AX52 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm15151-201ENSMUST00000117106 177 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm15313-201ENSMUST00000119179 282 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm14991-201ENSMUST00000119913 598 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Gm16290-201ENSMUST00000161175 474 ntBASIC3.55□□□□□ -1.84
Col6a4A2AX52 Mir7014-201ENSMUST00000183853 63 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms