Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm21735-201ENSMUST00000190360 696 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm29038-201ENSMUST00000191543 678 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm37881-201ENSMUST00000193001 421 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm9038-201ENSMUST00000203400 604 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CtcflA2APF3 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm14512-201ENSMUST00000117924 230 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm3267-201ENSMUST00000118671 473 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm14714-201ENSMUST00000119743 439 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm14175-201ENSMUST00000119835 241 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm1866-201ENSMUST00000120701 477 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm13677-201ENSMUST00000120739 595 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm14125-202ENSMUST00000120921 756 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.1□□□□□ -1.75
CtcflA2APF3 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm26352-201ENSMUST00000158223 125 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm16545-201ENSMUST00000161968 463 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm21856-201ENSMUST00000187547 696 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm28061-201ENSMUST00000189085 807 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm43580-201ENSMUST00000202892 284 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm44816-201ENSMUST00000206666 477 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm45031-201ENSMUST00000206800 288 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm23677-201ENSMUST00000083156 104 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CtcflA2APF3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CtcflA2APF3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.1□□□□□ -1.75
CtcflA2APF3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcflA2APF3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm25419-201ENSMUST00000104215 191 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm11408-201ENSMUST00000117889 519 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm23327-201ENSMUST00000157420 78 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm26001-201ENSMUST00000157989 103 ntBASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CtcflA2APF3 Gm8221-201ENSMUST00000178052 564 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms