Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm21191-201ENSMUST00000186484 930 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm29097-201ENSMUST00000190273 422 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm29503-201ENSMUST00000191044 930 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm38046-201ENSMUST00000192733 550 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm22897-202ENSMUST00000197782 127 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm18660-201ENSMUST00000199542 629 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm25099-201ENSMUST00000093716 116 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
H2afb2S4R1M3 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 BC055308-201ENSMUST00000193380 2538 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm12311-201ENSMUST00000118803 374 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm12237-201ENSMUST00000120158 470 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm12087-201ENSMUST00000121878 258 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Zakit-201ENSMUST00000157677 308 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm22116-201ENSMUST00000158791 141 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm27387-201ENSMUST00000184583 116 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm28060-201ENSMUST00000191554 189 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm5876-201ENSMUST00000203735 243 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm6988-201ENSMUST00000222676 375 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr192-201ENSMUST00000080251 925 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.37□□□□□ -1.71
H2afb2S4R1M3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm15333-201ENSMUST00000118825 364 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm12287-201ENSMUST00000119770 707 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm11910-201ENSMUST00000121624 432 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm22530-201ENSMUST00000158820 118 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm27896-201ENSMUST00000175162 317 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Mir7056-201ENSMUST00000183776 59 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm8458-201ENSMUST00000196658 819 ntBASIC4.36□□□□□ -1.71
H2afb2S4R1M3 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms