Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm13788-201ENSMUST00000120767 601 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm7365-201ENSMUST00000120877 639 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm5123-201ENSMUST00000121905 837 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm5755-201ENSMUST00000152394 837 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm23743-201ENSMUST00000157389 274 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm7316-201ENSMUST00000165395 445 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm27254-201ENSMUST00000183926 517 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Mir7087-201ENSMUST00000184840 70 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm28655-201ENSMUST00000191538 692 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm42459-201ENSMUST00000199679 742 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm45701-201ENSMUST00000212049 235 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm22126-201ENSMUST00000083244 142 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Trem1Q9JKE2 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm22231-201ENSMUST00000101027 73 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm26376-201ENSMUST00000104784 110 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm14890-201ENSMUST00000117660 676 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm13772-201ENSMUST00000118431 317 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm12752-201ENSMUST00000121657 811 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm14122-201ENSMUST00000122076 973 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm14905-201ENSMUST00000122351 639 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm22345-201ENSMUST00000122644 107 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm12833-201ENSMUST00000136112 477 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm26172-201ENSMUST00000158421 134 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Mir6539-201ENSMUST00000183732 110 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm28191-201ENSMUST00000189112 211 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm42542-201ENSMUST00000197978 268 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm45574-201ENSMUST00000210921 331 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm10064-201ENSMUST00000071235 399 ntBASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trem1Q9JKE2 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms