Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.29□□□□□ -1.72
Lima1Q9ERG0 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm22472-201ENSMUST00000104115 134 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm12465-201ENSMUST00000118591 300 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm11262-201ENSMUST00000119326 833 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm13932-201ENSMUST00000120873 610 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm24239-201ENSMUST00000157791 255 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm21850-201ENSMUST00000179792 359 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm28924-201ENSMUST00000190012 241 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm29552-201ENSMUST00000190548 660 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Lima1Q9ERG0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm12073-201ENSMUST00000117382 524 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm15206-201ENSMUST00000119143 454 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm11366-201ENSMUST00000119279 429 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm23960-201ENSMUST00000157206 131 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm22243-201ENSMUST00000178754 120 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm27636-201ENSMUST00000184528 122 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm18843-201ENSMUST00000194982 719 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm43631-201ENSMUST00000202011 369 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm43892-201ENSMUST00000204373 265 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm45006-201ENSMUST00000206078 690 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Lima1Q9ERG0 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm23322-201ENSMUST00000104464 167 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm4596-201ENSMUST00000117197 442 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm12112-201ENSMUST00000117772 231 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm16128-201ENSMUST00000117855 626 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm13902-201ENSMUST00000120168 605 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm6062-201ENSMUST00000120462 631 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm14303-201ENSMUST00000121320 171 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm15141-201ENSMUST00000121860 729 ntBASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lima1Q9ERG0 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms