Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.25□□□□□ -1.73
Use1Q9CQ56 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Use1Q9CQ56 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.25□□□□□ -1.73
Use1Q9CQ56 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Use1Q9CQ56 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm15297-201ENSMUST00000117795 290 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm12465-201ENSMUST00000118591 300 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm13118-201ENSMUST00000120402 549 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm8051-201ENSMUST00000120464 466 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm15926-201ENSMUST00000120492 550 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm14977-201ENSMUST00000121626 812 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm23781-201ENSMUST00000157940 308 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm15795-201ENSMUST00000160969 553 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm27039-201ENSMUST00000182438 962 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Mir6398-201ENSMUST00000184541 102 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm19181-201ENSMUST00000218891 940 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm18442-201ENSMUST00000220925 639 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Zfp850-201ENSMUST00000099111 941 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.24□□□□□ -1.73
Use1Q9CQ56 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Use1Q9CQ56 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm25096-201ENSMUST00000104043 129 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm12978-201ENSMUST00000121250 522 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm25824-201ENSMUST00000157092 121 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm25447-201ENSMUST00000158997 128 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm8214-201ENSMUST00000172123 351 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm28614-201ENSMUST00000186483 458 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm37631-201ENSMUST00000192275 364 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm36954-201ENSMUST00000195362 363 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm8106-201ENSMUST00000213123 523 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm46138-201ENSMUST00000215294 426 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Olfr881-201ENSMUST00000074611 948 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm26072-201ENSMUST00000083135 107 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Mir202-201ENSMUST00000083568 72 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Mir215-201ENSMUST00000083628 112 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm24031-201ENSMUST00000083930 131 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.23□□□□□ -1.73
Use1Q9CQ56 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Use1Q9CQ56 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Use1Q9CQ56 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm12285-201ENSMUST00000117347 233 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm13890-201ENSMUST00000117578 390 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm14107-201ENSMUST00000117774 330 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm12186-201ENSMUST00000119050 945 ntBASIC4.22□□□□□ -1.73
Use1Q9CQ56 Gm13508-201ENSMUST00000121639 775 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms