Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Trim8Q99PJ2 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm14529-201ENSMUST00000117894 406 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm6175-201ENSMUST00000121351 400 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm9597-201ENSMUST00000171913 602 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Mir6911-201ENSMUST00000184241 69 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Mir6952-201ENSMUST00000185092 61 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm37979-201ENSMUST00000193065 712 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm44135-201ENSMUST00000205221 368 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm19880-201ENSMUST00000207731 318 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm8672-201ENSMUST00000221200 332 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm25475-201ENSMUST00000082825 180 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm23677-201ENSMUST00000083156 104 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm17165-201ENSMUST00000096155 493 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim8Q99PJ2 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Mir700-201ENSMUST00000102169 79 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm16394-201ENSMUST00000117289 675 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm13454-201ENSMUST00000118166 483 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm13489-201ENSMUST00000121234 971 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm14237-201ENSMUST00000122080 430 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm2892-201ENSMUST00000145537 711 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm23149-201ENSMUST00000158837 230 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm16125-201ENSMUST00000159003 339 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm5929-201ENSMUST00000166883 487 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm23806-201ENSMUST00000175157 109 ntBASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim8Q99PJ2 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms