Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm19761-201ENSMUST00000205372 391 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm44754-201ENSMUST00000208155 400 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm24623-201ENSMUST00000082616 194 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.19□□□□□ -1.58
Clrn1Q8K445 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Clrn1Q8K445 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm11488-201ENSMUST00000117277 863 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm11447-201ENSMUST00000118983 858 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm7916-201ENSMUST00000120325 456 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm12332-201ENSMUST00000121397 922 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm25152-201ENSMUST00000157117 114 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm23030-201ENSMUST00000158004 273 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm23774-201ENSMUST00000158990 131 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Scarna10-201ENSMUST00000158992 325 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm23806-201ENSMUST00000175157 109 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm6055-201ENSMUST00000180532 378 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm27024-201ENSMUST00000182561 755 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm27148-201ENSMUST00000185086 160 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm3605-201ENSMUST00000185858 440 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm8823-201ENSMUST00000193158 433 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm38041-201ENSMUST00000194445 661 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm43078-201ENSMUST00000197222 168 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm44539-201ENSMUST00000206010 238 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm44946-201ENSMUST00000208425 572 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm21112-201ENSMUST00000212224 578 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm7760-201ENSMUST00000212265 578 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm7807-201ENSMUST00000212475 578 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm32526-201ENSMUST00000221878 981 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.18□□□□□ -1.58
Clrn1Q8K445 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Clrn1Q8K445 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm13803-201ENSMUST00000117547 489 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm14874-201ENSMUST00000118995 438 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm22076-201ENSMUST00000158601 84 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm25489-201ENSMUST00000158727 141 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm3076-201ENSMUST00000161613 451 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm17155-201ENSMUST00000165969 473 ntBASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Clrn1Q8K445 Gm22411-201ENSMUST00000175462 126 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms