Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm23608-201ENSMUST00000104545 128 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm11866-201ENSMUST00000120209 335 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm24113-201ENSMUST00000157477 276 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm27940-201ENSMUST00000184449 98 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm28118-201ENSMUST00000185957 294 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm8480-201ENSMUST00000190350 698 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm8861-201ENSMUST00000196346 832 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm19908-201ENSMUST00000204684 391 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm19096-201ENSMUST00000209705 766 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Gm39197-201ENSMUST00000212069 457 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cchcr1Q8K2I2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm11262-201ENSMUST00000119326 833 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm14714-201ENSMUST00000119743 439 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm12087-201ENSMUST00000121878 258 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm15534-201ENSMUST00000137642 562 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm23638-201ENSMUST00000175073 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm23158-201ENSMUST00000175076 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm22907-201ENSMUST00000175198 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm22625-201ENSMUST00000175382 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm22875-201ENSMUST00000175449 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm25197-201ENSMUST00000175516 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm27857-201ENSMUST00000176930 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm26268-201ENSMUST00000177685 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm23681-201ENSMUST00000178821 126 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm27636-201ENSMUST00000184528 122 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.13□□□□□ -1.59
Cchcr1Q8K2I2 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm22473-201ENSMUST00000104114 132 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm12261-201ENSMUST00000117499 645 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm22177-201ENSMUST00000175002 158 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm9499-201ENSMUST00000180888 964 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm28263-201ENSMUST00000185884 400 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm44765-201ENSMUST00000206927 601 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm45269-201ENSMUST00000210359 282 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Svet1-201ENSMUST00000209370 3940 ntBASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cchcr1Q8K2I2 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms