Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Nup88Q8CEC0 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.4□□□□□ -1.55
Nup88Q8CEC0 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm24124-201ENSMUST00000104103 132 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm13220-201ENSMUST00000121535 508 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm23496-201ENSMUST00000157741 248 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm23501-201ENSMUST00000157744 256 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm16134-201ENSMUST00000161714 336 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm20701-201ENSMUST00000176082 347 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm28967-201ENSMUST00000187351 281 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm37878-201ENSMUST00000192108 387 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm29747-201ENSMUST00000194764 585 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm25140-201ENSMUST00000083254 140 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm22155-201ENSMUST00000083836 162 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm10794-201ENSMUST00000099624 207 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup88Q8CEC0 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm11781-201ENSMUST00000118328 472 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm26373-201ENSMUST00000157833 103 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm18415-201ENSMUST00000177464 647 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Mir6899-201ENSMUST00000184798 64 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm27564-201ENSMUST00000185196 96 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm29138-201ENSMUST00000191444 348 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm37961-201ENSMUST00000192729 299 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm44656-201ENSMUST00000208428 490 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm45474-201ENSMUST00000209471 408 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Nsa2-203ENSMUST00000225410 974 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm25810-201ENSMUST00000082752 108 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.38□□□□□ -1.55
Nup88Q8CEC0 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm12190-201ENSMUST00000120001 187 ntBASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm25047-201ENSMUST00000122667 104 ntBASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.37□□□□□ -1.55
Nup88Q8CEC0 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms