Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24567-201ENSMUST00000179294 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23943-201ENSMUST00000179712 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25228-201ENSMUST00000180121 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23304-201ENSMUST00000180209 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26933-201ENSMUST00000182320 827 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Mir6411-201ENSMUST00000183556 108 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm37503-201ENSMUST00000192088 319 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm7897-201ENSMUST00000193981 554 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm36382-201ENSMUST00000198892 541 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm35558-202ENSMUST00000221819 499 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Snord15b-201ENSMUST00000083032 145 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25582-201ENSMUST00000083412 110 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm24578-201ENSMUST00000103970 129 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm14831-201ENSMUST00000120253 409 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm16254-201ENSMUST00000131528 730 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm25603-201ENSMUST00000158361 105 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm24175-201ENSMUST00000158931 129 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm6632-201ENSMUST00000168425 954 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm19807-201ENSMUST00000173971 667 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21241-201ENSMUST00000179551 934 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm27755-201ENSMUST00000184623 132 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm20819-201ENSMUST00000191091 925 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm20871-201ENSMUST00000191322 931 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm9632-201ENSMUST00000195934 643 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm42814-201ENSMUST00000199370 460 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm8719-201ENSMUST00000203602 534 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm18268-201ENSMUST00000208445 943 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Gm45409-201ENSMUST00000211486 252 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ubfd1Q78JW9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms