Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sp140Q6NSQ5 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sp140Q6NSQ5 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.22□□□□□ -1.57
Sp140Q6NSQ5 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sp140Q6NSQ5 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Sp140Q6NSQ5 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sp140Q6NSQ5 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sp140Q6NSQ5 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.21□□□□□ -1.57
Sp140Q6NSQ5 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm14711-201ENSMUST00000117056 217 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm7657-201ENSMUST00000118851 666 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm12768-201ENSMUST00000120055 759 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm23837-201ENSMUST00000122656 286 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm25052-201ENSMUST00000122661 158 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm24395-201ENSMUST00000158139 125 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm25907-201ENSMUST00000158486 125 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm27985-201ENSMUST00000185112 378 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm37882-201ENSMUST00000195254 196 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm43717-201ENSMUST00000198684 310 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm43368-201ENSMUST00000200638 409 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm44050-201ENSMUST00000204263 527 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm35558-202ENSMUST00000221819 499 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.21□□□□□ -1.58
Sp140Q6NSQ5 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm24429-201ENSMUST00000104076 132 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm14991-201ENSMUST00000119913 598 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm15791-201ENSMUST00000120365 319 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm17154-201ENSMUST00000165748 431 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm27854-201ENSMUST00000175578 244 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm10784-201ENSMUST00000178715 238 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm18728-201ENSMUST00000186155 753 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm29281-201ENSMUST00000188077 381 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm28191-201ENSMUST00000189112 211 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm18775-201ENSMUST00000190763 586 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm37421-201ENSMUST00000193088 132 ntBASIC5.2□□□□□ -1.58
Sp140Q6NSQ5 Gm10048-201ENSMUST00000194196 372 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms