Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm38070-201ENSMUST00000191850 6480 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm20667-201ENSMUST00000175674 1930 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm11737-201ENSMUST00000118713 468 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm12186-201ENSMUST00000119050 945 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm15900-201ENSMUST00000161584 342 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm10074-201ENSMUST00000174543 249 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm4854-201ENSMUST00000185902 574 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm29134-201ENSMUST00000186579 126 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm7858-201ENSMUST00000190177 622 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm28241-201ENSMUST00000190916 235 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm20940-201ENSMUST00000197308 360 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm45189-201ENSMUST00000208567 363 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm18507-201ENSMUST00000218855 525 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm18120-201ENSMUST00000220079 511 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm9309-201ENSMUST00000223537 546 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 AC161572.1-201ENSMUST00000227486 640 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 AC164297.6-201ENSMUST00000224643 1568 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm10743-201ENSMUST00000219611 2358 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm8323-201ENSMUST00000168436 1201 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm24081-201ENSMUST00000175177 125 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm2871-201ENSMUST00000179984 1204 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm45081-201ENSMUST00000206281 572 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm19880-201ENSMUST00000207731 318 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 AC154521.1-201ENSMUST00000222635 330 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 AC161252.2-201ENSMUST00000224978 374 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm43843-201ENSMUST00000202396 1587 ntBASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim41Q5NCC3 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm13510-201ENSMUST00000118659 429 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm13737-201ENSMUST00000119793 232 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Mir6362-201ENSMUST00000184329 107 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm38167-201ENSMUST00000195704 1178 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm2142-201ENSMUST00000197899 589 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm31211-201ENSMUST00000199170 253 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm5551-201ENSMUST00000199720 690 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Mir219c-201ENSMUST00000199860 60 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 AC164315.1-201ENSMUST00000226452 708 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 AC154846.2-201ENSMUST00000228805 424 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm43285-201ENSMUST00000196563 3592 ntBASIC10.67□□□□□ -0.7
Trim41Q5NCC3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim41Q5NCC3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm18310-201ENSMUST00000206494 3912 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm23332-201ENSMUST00000157424 275 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm3030-201ENSMUST00000163410 516 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm18444-201ENSMUST00000191239 629 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms