Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm13488-201ENSMUST00000120419 179 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm16359-201ENSMUST00000124511 289 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm15274-201ENSMUST00000131442 291 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm21979-201ENSMUST00000139887 291 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm15259-201ENSMUST00000151262 291 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm22519-201ENSMUST00000158270 178 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm29159-201ENSMUST00000187969 379 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm28438-201ENSMUST00000188299 345 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm44234-201ENSMUST00000204246 900 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm44048-201ENSMUST00000204531 361 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm45026-201ENSMUST00000205292 833 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm39197-201ENSMUST00000212069 457 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Platr25-208ENSMUST00000222602 939 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC154424.1-201ENSMUST00000225883 799 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm23330-201ENSMUST00000082660 164 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm25140-201ENSMUST00000083254 140 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim40Q3UWA4 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm22273-201ENSMUST00000104040 132 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm14706-201ENSMUST00000117744 255 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm11481-201ENSMUST00000120069 255 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm14125-202ENSMUST00000120921 756 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm5391-201ENSMUST00000121155 613 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm25293-201ENSMUST00000122792 285 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm27864-201ENSMUST00000183704 190 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm28097-201ENSMUST00000187333 366 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm28625-201ENSMUST00000188309 205 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm3145-201ENSMUST00000188584 220 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm37095-201ENSMUST00000195421 205 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm43828-201ENSMUST00000196890 639 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm43408-201ENSMUST00000198263 440 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm43478-201ENSMUST00000200381 292 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm43580-201ENSMUST00000202892 284 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm4714-201ENSMUST00000203395 279 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm18904-201ENSMUST00000218756 329 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm7040-201ENSMUST00000223271 443 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms