Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm44543-201ENSMUST00000209136 396 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm3338-201ENSMUST00000220982 269 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Gm8724-201ENSMUST00000081668 483 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.45□□□□□ -1.7
Trafd1Q3UDK1 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Mir466i-201ENSMUST00000116924 121 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm14107-201ENSMUST00000117774 330 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm14388-201ENSMUST00000118119 477 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm12186-201ENSMUST00000119050 945 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm15206-201ENSMUST00000119143 454 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm45007-201ENSMUST00000206237 366 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm44869-201ENSMUST00000208836 357 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm23510-201ENSMUST00000083083 163 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trafd1Q3UDK1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm24125-201ENSMUST00000104105 137 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm11914-201ENSMUST00000117094 507 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm15553-201ENSMUST00000118757 430 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm4910-201ENSMUST00000119605 366 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm6062-201ENSMUST00000120462 631 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm23171-201ENSMUST00000157159 264 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm24507-201ENSMUST00000157683 134 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Mir6374-201ENSMUST00000184003 107 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Mir6926-201ENSMUST00000184562 68 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm29138-201ENSMUST00000191444 348 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm43586-201ENSMUST00000195948 310 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm2622-201ENSMUST00000200018 471 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm45392-201ENSMUST00000210441 214 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Gm19786-201ENSMUST00000222589 580 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.43□□□□□ -1.7
Trafd1Q3UDK1 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms