Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.21□□□□□ -1.57
Usp39Q3TIX9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm15531-201ENSMUST00000118062 252 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm16428-201ENSMUST00000121193 723 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm23981-201ENSMUST00000157136 106 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm27044-201ENSMUST00000183033 796 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm29259-201ENSMUST00000186396 694 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm36638-201ENSMUST00000193295 400 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm43712-201ENSMUST00000198020 291 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm33601-201ENSMUST00000210001 961 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm22807-201ENSMUST00000082737 129 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm25682-201ENSMUST00000083942 164 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp39Q3TIX9 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm11970-201ENSMUST00000116105 320 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm15001-201ENSMUST00000117657 795 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm13579-201ENSMUST00000118519 517 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm11904-201ENSMUST00000120562 248 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm15044-201ENSMUST00000120703 598 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm15157-201ENSMUST00000121852 702 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm13471-201ENSMUST00000122057 433 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm25979-201ENSMUST00000157177 138 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm5974-201ENSMUST00000181607 986 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm27355-201ENSMUST00000185045 128 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm27985-201ENSMUST00000185112 378 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm28188-201ENSMUST00000190483 236 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm2979-201ENSMUST00000193442 463 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm29813-201ENSMUST00000195856 447 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm20940-201ENSMUST00000197308 360 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm8039-201ENSMUST00000204758 712 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm18997-201ENSMUST00000216353 822 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm4052-201ENSMUST00000220890 451 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Gm9762-201ENSMUST00000036976 444 ntBASIC5.2□□□□□ -1.58
Usp39Q3TIX9 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms