Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm29489-201ENSMUST00000188934 324 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm28090-201ENSMUST00000189458 664 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm21647-201ENSMUST00000189755 664 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm29848-201ENSMUST00000203107 295 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm2011-203ENSMUST00000203750 435 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm7039-201ENSMUST00000205138 346 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm44132-201ENSMUST00000205142 151 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm8911-201ENSMUST00000213986 652 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm23614-201ENSMUST00000082598 107 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Mir421-201ENSMUST00000083575 76 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ebf1Q07802 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Ebf1Q07802 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.73□□□□□ -1.49
Ebf1Q07802 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm24273-201ENSMUST00000102332 164 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm12985-201ENSMUST00000118376 183 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm14307-201ENSMUST00000118930 291 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm15791-201ENSMUST00000120365 319 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm14601-201ENSMUST00000120892 236 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm14297-201ENSMUST00000129110 291 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm5924-201ENSMUST00000132554 871 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm23435-201ENSMUST00000157183 156 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm23852-201ENSMUST00000158376 77 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm28429-201ENSMUST00000188521 363 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm29592-201ENSMUST00000189434 370 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm37095-201ENSMUST00000195421 205 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm44465-201ENSMUST00000199536 114 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm7624-201ENSMUST00000209702 435 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm19256-201ENSMUST00000218550 231 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm6171-201ENSMUST00000220760 645 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 AC154390.1-201ENSMUST00000225629 277 ntBASIC5.72□□□□□ -1.49
Ebf1Q07802 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ebf1Q07802 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Ebf1Q07802 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ebf1Q07802 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms