Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm11909-201ENSMUST00000121424 759 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm12785-201ENSMUST00000122052 172 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm14613-201ENSMUST00000122239 752 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.76□□□□□ -1.33
Col9a1Q05722 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm26350-201ENSMUST00000157531 288 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm16353-201ENSMUST00000159458 1223 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm5263-201ENSMUST00000163646 601 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm4222-201ENSMUST00000165784 470 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm8114-201ENSMUST00000172225 484 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Mir3080-201ENSMUST00000175010 79 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Mir3085-201ENSMUST00000175493 89 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm5139-201ENSMUST00000175943 249 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm24464-201ENSMUST00000179697 107 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm37568-201ENSMUST00000191755 364 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm42579-201ENSMUST00000200512 734 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm22571-201ENSMUST00000082984 70 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm43736-201ENSMUST00000196377 2281 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm35172-201ENSMUST00000196037 2649 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm43896-201ENSMUST00000203440 2032 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col9a1Q05722 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.76□□□□□ -1.33
Col9a1Q05722 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col9a1Q05722 Gm44104-201ENSMUST00000204736 3777 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm24544-201ENSMUST00000103862 110 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Mir1188-201ENSMUST00000116756 120 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm22714-201ENSMUST00000116894 78 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm15203-201ENSMUST00000117668 455 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm24784-201ENSMUST00000157640 62 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm24689-201ENSMUST00000157760 104 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm21232-201ENSMUST00000182187 1006 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm27410-201ENSMUST00000183851 115 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm37128-201ENSMUST00000192599 232 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm17988-201ENSMUST00000208796 535 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm19196-201ENSMUST00000209258 357 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm45722-201ENSMUST00000213075 466 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC6.75□□□□□ -1.33
Col9a1Q05722 AC125374.2-201ENSMUST00000214278 162 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm23460-201ENSMUST00000083258 109 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm24695-201ENSMUST00000083877 83 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.75□□□□□ -1.33
Col9a1Q05722 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col9a1Q05722 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms