Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm28584-201ENSMUST00000191489 696 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm38138-201ENSMUST00000193274 696 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm37341-201ENSMUST00000194680 371 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm19739-201ENSMUST00000195941 153 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm43516-201ENSMUST00000196891 322 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm43368-201ENSMUST00000200638 409 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm45070-201ENSMUST00000208100 246 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm45474-201ENSMUST00000209471 408 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm18587-201ENSMUST00000213736 841 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm19181-201ENSMUST00000218891 940 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm19599-201ENSMUST00000218898 358 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Col8a1Q00780 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm19441-201ENSMUST00000221545 330 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.01□□□□□ -1.61
Col8a1Q00780 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.01□□□□□ -1.61
Col8a1Q00780 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col8a1Q00780 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col8a1Q00780 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm15182-201ENSMUST00000120832 1676 ntBASIC5□□□□□ -1.61
Col8a1Q00780 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm6591-201ENSMUST00000121063 434 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm11363-201ENSMUST00000121672 548 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm12094-201ENSMUST00000121781 472 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5□□□□□ -1.61
Col8a1Q00780 Mir1963-201ENSMUST00000158594 59 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm18604-201ENSMUST00000172535 558 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm28116-201ENSMUST00000189064 387 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm37103-201ENSMUST00000191830 115 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm17934-201ENSMUST00000192818 422 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm44494-201ENSMUST00000196760 129 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm2287-202ENSMUST00000199619 1000 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm42663-201ENSMUST00000199883 351 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Gm18903-201ENSMUST00000215343 480 ntBASIC5□□□□□ -1.61
Col8a1Q00780 AC153943.1-201ENSMUST00000219312 256 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm7045-201ENSMUST00000221466 605 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5□□□□□ -1.61
Col8a1Q00780 AC131178.1-201ENSMUST00000228649 492 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm10064-201ENSMUST00000071235 399 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Gm5321-201ENSMUST00000072050 447 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm25147-201ENSMUST00000083030 105 ntBASIC5□□□□□ -1.61
Col8a1Q00780 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm7133-201ENSMUST00000187797 2039 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms