Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Cux1P53564 Gm37192-201ENSMUST00000194479 1348 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Gm23319-201ENSMUST00000104467 131 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Gm13785-201ENSMUST00000119099 690 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Gm22958-201ENSMUST00000122512 184 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Mir7047-201ENSMUST00000184595 64 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Gm37045-201ENSMUST00000192016 2463 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 AC161256.1-201ENSMUST00000217312 213 ntBASIC6.54□□□□□ -1.36
Cux1P53564 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC6.54□□□□□ -1.36
Cux1P53564 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cux1P53564 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cux1P53564 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.54□□□□□ -1.36
Cux1P53564 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cux1P53564 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.54□□□□□ -1.36
Cux1P53564 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 Gm14605-201ENSMUST00000120599 268 ntBASIC6.53□□□□□ -1.36
Cux1P53564 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC6.53□□□□□ -1.36
Cux1P53564 Gm22059-201ENSMUST00000157544 104 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm23781-201ENSMUST00000157940 308 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm24850-201ENSMUST00000158029 119 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm10357-201ENSMUST00000159886 264 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm5974-201ENSMUST00000181607 986 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cux1P53564 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cux1P53564 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.53□□□□□ -1.36
Cux1P53564 Gm18306-201ENSMUST00000207338 569 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm45553-201ENSMUST00000209929 507 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cux1P53564 Mir132-201ENSMUST00000083603 66 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cux1P53564 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cux1P53564 Gm43329-201ENSMUST00000200120 3232 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 Gm44847-201ENSMUST00000207104 1991 ntBASIC6.53□□□□□ -1.36
Cux1P53564 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cux1P53564 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 AC149588.1-201ENSMUST00000228274 3745 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm15534-201ENSMUST00000137642 562 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm7241-201ENSMUST00000159853 357 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm18350-201ENSMUST00000187395 955 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm29598-201ENSMUST00000188996 588 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm37791-201ENSMUST00000195081 286 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC6.52□□□□□ -1.37
Cux1P53564 AC139750.2-201ENSMUST00000224424 386 ntBASIC6.52□□□□□ -1.37
Cux1P53564 AC134577.1-201ENSMUST00000227572 295 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cux1P53564 Gm23443-201ENSMUST00000082916 128 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cux1P53564 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Cux1P53564 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cux1P53564 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cux1P53564 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cux1P53564 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cux1P53564 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 Gm43260-201ENSMUST00000197378 2430 ntBASIC6.52□□□□□ -1.37
Cux1P53564 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC6.52□□□□□ -1.37
Cux1P53564 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cux1P53564 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cux1P53564 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cux1P53564 Gm24544-201ENSMUST00000103862 110 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC6.51□□□□□ -1.37
Cux1P53564 Gm12900-201ENSMUST00000120919 573 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC6.51□□□□□ -1.37
Cux1P53564 Gm38150-201ENSMUST00000192996 452 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Cux1P53564 AC155266.1-201ENSMUST00000220762 904 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Mir323-201ENSMUST00000083683 86 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cux1P53564 Gm43327-201ENSMUST00000199285 4055 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cux1P53564 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cux1P53564 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cux1P53564 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.51□□□□□ -1.37
Cux1P53564 Gm12978-201ENSMUST00000121250 522 ntBASIC6.5□□□□□ -1.37
Cux1P53564 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC6.5□□□□□ -1.37
Cux1P53564 Gm23499-201ENSMUST00000157736 268 ntBASIC6.5□□□□□ -1.37
Cux1P53564 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.5□□□□□ -1.37
Cux1P53564 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.5□□□□□ -1.37
Cux1P53564 Gm42453-201ENSMUST00000200477 409 ntBASIC6.5□□□□□ -1.37
Cux1P53564 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms