Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm24517-201ENSMUST00000122560 107 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm26350-201ENSMUST00000157531 288 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm25383-201ENSMUST00000157810 144 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm24724-201ENSMUST00000158230 107 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm6632-201ENSMUST00000168425 954 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm22355-201ENSMUST00000175531 96 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm18406-201ENSMUST00000185872 669 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm37550-201ENSMUST00000193230 463 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm37070-201ENSMUST00000193272 460 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Shmt1P50431 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm43794-201ENSMUST00000200971 692 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Shmt1P50431 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm4057-201ENSMUST00000221407 368 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 AL590614.1-201ENSMUST00000226037 268 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr192-201ENSMUST00000080251 925 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm25404-201ENSMUST00000082970 107 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm23972-201ENSMUST00000083322 165 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Shmt1P50431 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Shmt1P50431 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Shmt1P50431 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Shmt1P50431 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Shmt1P50431 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.54□□□□□ -1.52
Shmt1P50431 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm26300-201ENSMUST00000102282 94 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Mir190b-201ENSMUST00000104803 80 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm11550-201ENSMUST00000118210 699 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm14600-201ENSMUST00000121032 630 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm15388-201ENSMUST00000121578 726 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm6568-201ENSMUST00000122274 697 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.53□□□□□ -1.52
Shmt1P50431 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm24969-201ENSMUST00000180331 79 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm28976-201ENSMUST00000188070 144 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm37503-201ENSMUST00000192088 319 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm34176-201ENSMUST00000192621 474 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm17893-201ENSMUST00000203017 770 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm44449-201ENSMUST00000203610 153 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.53□□□□□ -1.52
Shmt1P50431 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Shmt1P50431 Mir30b-201ENSMUST00000083542 96 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Shmt1P50431 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.53□□□□□ -1.52
Shmt1P50431 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Shmt1P50431 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Shmt1P50431 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms