Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm14909-201ENSMUST00000117853 351 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm8475-201ENSMUST00000118211 526 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm15206-201ENSMUST00000119143 454 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm17060-201ENSMUST00000172394 824 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Traf1P39428 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Gm18181-201ENSMUST00000190670 736 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm37961-201ENSMUST00000192729 299 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm37167-201ENSMUST00000194946 396 ntBASIC5.47□□□□□ -1.53
Traf1P39428 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm44261-201ENSMUST00000203337 209 ntBASIC5.47□□□□□ -1.53
Traf1P39428 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.47□□□□□ -1.53
Traf1P39428 Gm44138-201ENSMUST00000204939 271 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.47□□□□□ -1.53
Traf1P39428 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.47□□□□□ -1.53
Traf1P39428 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Gm46996-201ENSMUST00000220924 408 ntBASIC5.47□□□□□ -1.53
Traf1P39428 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Snora52-201ENSMUST00000082732 137 ntBASIC5.47□□□□□ -1.53
Traf1P39428 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.47□□□□□ -1.53
Traf1P39428 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Traf1P39428 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.46□□□□□ -1.53
Traf1P39428 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Traf1P39428 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm15333-201ENSMUST00000118825 364 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm12105-201ENSMUST00000120846 779 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm12893-201ENSMUST00000121732 275 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm13745-201ENSMUST00000121994 527 ntBASIC5.46□□□□□ -1.54
Traf1P39428 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Gm24251-201ENSMUST00000157324 114 ntBASIC5.46□□□□□ -1.54
Traf1P39428 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.46□□□□□ -1.54
Traf1P39428 Gm27875-201ENSMUST00000184425 123 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Mir7028-201ENSMUST00000185016 64 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm29668-201ENSMUST00000187802 315 ntBASIC5.46□□□□□ -1.54
Traf1P39428 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Gm20954-201ENSMUST00000189078 644 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm29138-201ENSMUST00000191444 348 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.46□□□□□ -1.54
Traf1P39428 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Gm44865-201ENSMUST00000207240 531 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.46□□□□□ -1.54
Traf1P39428 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.46□□□□□ -1.54
Traf1P39428 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.46□□□□□ -1.54
Traf1P39428 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Gm24031-201ENSMUST00000083930 131 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Mir504-201ENSMUST00000093602 79 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Traf1P39428 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Traf1P39428 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.46□□□□□ -1.54
Traf1P39428 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.45□□□□□ -1.54
Traf1P39428 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Traf1P39428 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Traf1P39428 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Traf1P39428 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Traf1P39428 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Traf1P39428 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Traf1P39428 Gm22676-201ENSMUST00000116972 129 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm14575-201ENSMUST00000117210 560 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm6893-201ENSMUST00000118385 522 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm15120-201ENSMUST00000120602 301 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Traf1P39428 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.45□□□□□ -1.54
Traf1P39428 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Traf1P39428 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.45□□□□□ -1.54
Traf1P39428 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Traf1P39428 Gm22378-201ENSMUST00000157481 111 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm20428-201ENSMUST00000174365 283 ntBASIC5.45□□□□□ -1.54
Traf1P39428 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Traf1P39428 Gm21856-201ENSMUST00000187547 696 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm21735-201ENSMUST00000190360 696 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Gm43925-201ENSMUST00000203498 206 ntBASIC5.45□□□□□ -1.54
Traf1P39428 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.45□□□□□ -1.54
Traf1P39428 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.45□□□□□ -1.54
Traf1P39428 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.45□□□□□ -1.54
Traf1P39428 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Traf1P39428 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Traf1P39428 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Traf1P39428 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Traf1P39428 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Traf1P39428 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms