Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23872-201ENSMUST00000175432 77 ntBASIC4.82□□□□□ -1.64
Lire1P11260 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm28385-201ENSMUST00000185671 292 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm17953-201ENSMUST00000192061 667 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm44038-201ENSMUST00000203952 889 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm19726-201ENSMUST00000205008 240 ntBASIC4.82□□□□□ -1.64
Lire1P11260 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.82□□□□□ -1.64
Lire1P11260 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.82□□□□□ -1.64
Lire1P11260 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.82□□□□□ -1.64
Lire1P11260 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.82□□□□□ -1.64
Lire1P11260 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.82□□□□□ -1.64
Lire1P11260 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.82□□□□□ -1.64
Lire1P11260 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.82□□□□□ -1.64
Lire1P11260 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lire1P11260 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm42662-201ENSMUST00000202539 1431 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Lire1P11260 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Gm12392-201ENSMUST00000118014 938 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm13503-201ENSMUST00000119017 446 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Lire1P11260 Gm25898-201ENSMUST00000158303 106 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm6872-201ENSMUST00000165001 700 ntBASIC4.81□□□□□ -1.64
Lire1P11260 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.81□□□□□ -1.64
Lire1P11260 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Gm27718-201ENSMUST00000183721 86 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm27148-201ENSMUST00000185086 160 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28604-201ENSMUST00000186629 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28566-201ENSMUST00000186714 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28194-201ENSMUST00000187412 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28886-202ENSMUST00000187889 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28554-202ENSMUST00000189175 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29213-202ENSMUST00000189703 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28851-202ENSMUST00000189757 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28461-201ENSMUST00000190023 484 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms