Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm9836-201ENSMUST00000117132 216 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm15988-201ENSMUST00000118677 367 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm24998-201ENSMUST00000157908 89 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm23215-201ENSMUST00000178153 121 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm21638-201ENSMUST00000179473 836 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm37700-201ENSMUST00000192617 965 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm24147-201ENSMUST00000082763 144 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm35629-201ENSMUST00000209684 2241 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm38128-201ENSMUST00000192085 3250 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm15394-201ENSMUST00000119656 1308 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm25595-201ENSMUST00000102273 97 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm38360-201ENSMUST00000195130 454 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm44003-201ENSMUST00000203024 490 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm44032-201ENSMUST00000204841 166 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 AC122188.1-201ENSMUST00000217534 312 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 AC113031.3-201ENSMUST00000226552 190 ntBASIC3.59□□□□□ -1.84
Col6a4A2AX52 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col6a4A2AX52 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm13268-201ENSMUST00000117485 433 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm14621-201ENSMUST00000117709 689 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm15014-201ENSMUST00000120742 258 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm23115-201ENSMUST00000158480 108 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm45359-201ENSMUST00000210635 427 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 AC122305.2-201ENSMUST00000215148 834 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm37558-201ENSMUST00000193684 2983 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm13902-201ENSMUST00000120168 605 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm28314-201ENSMUST00000191276 345 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 AC158633.1-201ENSMUST00000219892 649 ntBASIC3.58□□□□□ -1.84
Col6a4A2AX52 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a4A2AX52 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a4A2AX52 AC122769.3-201ENSMUST00000227739 3245 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms