Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Svet1-201ENSMUST00000209370 3940 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm11719-201ENSMUST00000119399 351 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm11510-201ENSMUST00000120278 347 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm17109-201ENSMUST00000163985 358 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm19774-201ENSMUST00000190667 114 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm38270-201ENSMUST00000192721 407 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm6171-201ENSMUST00000220760 645 ntBASIC4.42□□□□□ -1.7
Scn1aA2APX8 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Scn1aA2APX8 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Mir551b-201ENSMUST00000102165 98 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm13321-201ENSMUST00000117101 400 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm11893-201ENSMUST00000117829 491 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm26036-201ENSMUST00000158149 144 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm25025-201ENSMUST00000175018 111 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm28267-201ENSMUST00000191093 265 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm44765-201ENSMUST00000206927 601 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm23302-201ENSMUST00000082710 100 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm8430-201ENSMUST00000119780 471 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm21816-201ENSMUST00000179255 360 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm36259-201ENSMUST00000197340 392 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.41□□□□□ -1.7
Scn1aA2APX8 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Scn1aA2APX8 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm26418-201ENSMUST00000104275 137 ntBASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm11692-201ENSMUST00000122121 902 ntBASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm43304-201ENSMUST00000196803 326 ntBASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm25481-201ENSMUST00000083221 158 ntBASIC4.4□□□□□ -1.7
Scn1aA2APX8 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.4□□□□□ -1.7
Scn1aA2APX8 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Scn1aA2APX8 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.4□□□□□ -1.71
Scn1aA2APX8 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scn1aA2APX8 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.4□□□□□ -1.71
Scn1aA2APX8 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.4□□□□□ -1.71
Scn1aA2APX8 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.4□□□□□ -1.71
Scn1aA2APX8 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scn1aA2APX8 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.4□□□□□ -1.71
Scn1aA2APX8 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Scn1aA2APX8 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.4□□□□□ -1.71
Scn1aA2APX8 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms