Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm22473-201ENSMUST00000104114 132 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm24251-201ENSMUST00000157324 114 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm17060-201ENSMUST00000172394 824 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm20657-201ENSMUST00000177079 515 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm19898-201ENSMUST00000177490 251 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm27690-201ENSMUST00000184596 126 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm6075-201ENSMUST00000186816 486 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm37878-201ENSMUST00000192108 387 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm37636-201ENSMUST00000193583 359 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm43922-201ENSMUST00000205071 328 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm44523-201ENSMUST00000205616 417 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm45857-201ENSMUST00000212207 356 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm46327-201ENSMUST00000218240 365 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cdc40Q9DC48 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.26□□□□□ -1.73
Cdc40Q9DC48 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Mir676-201ENSMUST00000102443 89 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm11877-201ENSMUST00000118921 852 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm13902-201ENSMUST00000120168 605 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm12807-201ENSMUST00000121546 962 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm24774-201ENSMUST00000157384 134 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3077-201ENSMUST00000165903 627 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3084-201ENSMUST00000169967 598 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm21991-201ENSMUST00000180006 508 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm26983-201ENSMUST00000182051 388 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm3145-201ENSMUST00000188584 220 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm20946-201ENSMUST00000212367 461 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm45710-201ENSMUST00000212847 215 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm46996-201ENSMUST00000220924 408 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cdc40Q9DC48 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.24□□□□□ -1.73
Cdc40Q9DC48 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Cdc40Q9DC48 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms