Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 AC133654.1-201ENSMUST00000228411 672 ntBASIC5□□□□□ -1.61
Vps28Q9D1C8 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps28Q9D1C8 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps28Q9D1C8 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps28Q9D1C8 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm22543-201ENSMUST00000104347 94 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm23879-201ENSMUST00000116874 126 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm14750-201ENSMUST00000118262 516 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm15012-201ENSMUST00000119176 106 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm13149-201ENSMUST00000122071 339 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm23513-201ENSMUST00000158181 133 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Trbv10-201ENSMUST00000168322 289 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm20674-201ENSMUST00000177452 369 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm9499-201ENSMUST00000180888 964 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm27715-201ENSMUST00000184714 260 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm28438-201ENSMUST00000188299 345 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm29785-201ENSMUST00000217033 383 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps28Q9D1C8 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm11366-201ENSMUST00000119279 429 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm14599-201ENSMUST00000120469 474 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm24965-201ENSMUST00000157922 106 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm24931-201ENSMUST00000158324 107 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm24944-201ENSMUST00000158330 128 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm16566-201ENSMUST00000160387 910 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm16563-201ENSMUST00000162673 423 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms