Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm23467-201ENSMUST00000157127 159 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Mir6899-201ENSMUST00000184798 64 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm37908-201ENSMUST00000195828 470 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm43136-201ENSMUST00000200403 636 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm8106-201ENSMUST00000213123 523 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm46327-201ENSMUST00000218240 365 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Smc1aQ9CU62 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.21□□□□□ -1.58
Smc1aQ9CU62 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm22488-201ENSMUST00000116811 127 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm6754-201ENSMUST00000117124 913 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm13745-201ENSMUST00000121994 527 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Mir3104-201ENSMUST00000174911 63 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm22177-201ENSMUST00000175002 158 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Mir6975-201ENSMUST00000184879 61 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm21856-201ENSMUST00000187547 696 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm21735-201ENSMUST00000190360 696 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Smc1aQ9CU62 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm14304-201ENSMUST00000117272 446 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm14909-201ENSMUST00000117853 351 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm25150-201ENSMUST00000157121 60 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm19898-201ENSMUST00000177490 251 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm16378-201ENSMUST00000179168 342 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm28118-201ENSMUST00000185957 294 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm5372-201ENSMUST00000187540 409 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm37167-201ENSMUST00000194946 396 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm44402-201ENSMUST00000203677 238 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.19□□□□□ -1.58
Smc1aQ9CU62 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.19□□□□□ -1.58
Smc1aQ9CU62 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms