Protein–RNA interactions for Protein: Q9CR40

Klhl28, Kelch-like protein 28, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhl28Q9CR40 Gm12186-201ENSMUST00000119050 945 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm15166-201ENSMUST00000120790 385 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm6075-201ENSMUST00000186816 486 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm29668-201ENSMUST00000187802 315 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm44474-201ENSMUST00000196525 127 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm43524-201ENSMUST00000197278 298 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm18258-201ENSMUST00000210413 542 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Mir99a-201ENSMUST00000083596 65 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm25005-201ENSMUST00000083812 156 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Klhl28Q9CR40 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm12760-201ENSMUST00000117861 482 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm14991-201ENSMUST00000119913 598 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm5391-201ENSMUST00000121155 613 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm24628-201ENSMUST00000122761 289 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm24441-201ENSMUST00000157235 281 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm24751-201ENSMUST00000157844 102 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm23179-201ENSMUST00000158693 304 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm16566-201ENSMUST00000160387 910 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm29552-201ENSMUST00000190548 660 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm17953-201ENSMUST00000192061 667 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm36986-201ENSMUST00000195320 353 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 AC172027.1-201ENSMUST00000217659 337 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Nsa2-203ENSMUST00000225410 974 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm16415-201ENSMUST00000080097 489 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm10916-201ENSMUST00000080330 483 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Klhl28Q9CR40 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.41□□□□□ -1.7
Klhl28Q9CR40 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.41□□□□□ -1.7
Klhl28Q9CR40 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Klhl28Q9CR40 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Klhl28Q9CR40 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms