Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Gm25200-201ENSMUST00000083094 130 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Mir370-201ENSMUST00000083499 79 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdh23Q99PF4 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm11372-201ENSMUST00000117348 570 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm23226-201ENSMUST00000116927 103 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm12173-201ENSMUST00000117622 273 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm26141-201ENSMUST00000175299 126 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Gm28389-201ENSMUST00000190090 697 ntBASIC4.19□□□□□ -1.74
Cdh23Q99PF4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm15981-201ENSMUST00000119196 457 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm26607-201ENSMUST00000180661 867 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm37682-201ENSMUST00000191776 522 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm43217-201ENSMUST00000199513 367 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm25369-201ENSMUST00000158848 132 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Mir7k-201ENSMUST00000184115 110 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdh23Q99PF4 Gm14981-201ENSMUST00000117325 943 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm26276-201ENSMUST00000157099 109 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm9765-201ENSMUST00000043170 321 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm7834-201ENSMUST00000117560 437 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm23602-201ENSMUST00000157258 132 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm7639-201ENSMUST00000212608 484 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Gm19073-201ENSMUST00000219978 555 ntBASIC4.17□□□□□ -1.74
Cdh23Q99PF4 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms